Biopython — вычислительная молекулярная биология

★ 7.0 · research

biopython is a Claude Code skill that brings the full Biopython 1.87 computational molecular biology toolkit into AI-assisted workflows. It covers sequence manipulation (DNA, RNA, protein), file parsing across FASTA, GenBank, FASTQ, PDB, and mmCIF formats, programmatic access to NCBI databases via Bio.Entrez, BLAST search automation, pairwise and multiple sequence alignments, 3D protein structure analysis with Bio.PDB, and phylogenetic tree operations via Bio.Phylo. The skill requires Python 3.10+ and NumPy; Entrez and web BLAST calls use the optional NCBI_EMAIL and NCBI_API_KEY environment variables, while local BLAST or MUSCLE require separate installation. It is best suited for batch processing, building custom bioinformatics pipelines, and BLAST automation — making it the right choice for researchers and bioinformaticians handling genomic data or structural biology at scale.